Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | SAMN05421820_101565 | Not Available | Positive | 692634 - 695840 | 120244.0 |
| hypothetical protein | SAMN05421820_101566 | Not Available | Positive | 695897 - 696973 | 38810.0 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN05421820_101567 | Not Available | Positive | 697336 - 698175 | 32541.1 |
| transcriptional regulatory protein, c terminal | SAMN05421820_101568 | Not Available | Negative | 698395 - 699285 | 33713.0 |
| two component regulator propeller | SAMN05421820_101569 | Not Available | Positive | 699389 - 700498 | 41731.7 |
| arac family transcriptional regulator | SAMN05421820_101570 | Not Available | Negative | 700632 - 701555 | 35314.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_101571 | Not Available | Positive | 701787 - 702386 | 23603.4 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421820_101572 | Not Available | Positive | 702445 - 703368 | 35156.4 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_101573 | Not Available | Positive | 703513 - 706944 | 129042.0 |
| hypothetical protein | SAMN05421820_101574 | Not Available | Positive | 706967 - 707758 | 29678.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

