Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | SAMN05421820_11360 | Not Available | Negative | 6873667 - 6874788 | 43447.8 |
| hypothetical protein | SAMN05421820_11361 | Not Available | Positive | 6874956 - 6875456 | 18406.8 |
| protein of unknown function | SAMN05421820_11362 | Not Available | Positive | 6875467 - 6876216 | 27766.3 |
| c-terminus of aa_permease | SAMN05421820_11363 | Not Available | Negative | 6876814 - 6878769 | 71382.1 |
| oligoendopeptidase f | SAMN05421820_11364 | Not Available | Negative | 6878827 - 6880542 | 66110.5 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05421820_11365 | Not Available | Negative | 6880712 - 6881581 | 32415.4 |
| gtp-binding protein | SAMN05421820_11366 | Not Available | Negative | 6881592 - 6882221 | 23745.7 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN05421820_11367 | Not Available | Positive | 6882274 - 6883005 | 27327.0 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421820_11368 | Not Available | Positive | 6883043 - 6883804 | 28949.8 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421820_11369 | Not Available | Positive | 6883928 - 6884683 | 27414.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

