Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | SAMN05421820_11350 | Not Available | Negative | 6860432 - 6861277 | 30860.8 |
| glucose/galactose transporter | SAMN05421820_11351 | Not Available | Positive | 6861520 - 6862803 | 46531.3 |
| signal transduction histidine kinase | SAMN05421820_11352 | Not Available | Positive | 6862982 - 6864484 | 55985.8 |
| peroxiredoxin q/bcp | SAMN05421820_11353 | Not Available | Negative | 6864534 - 6864995 | 16989.1 |
| peptidase family m23 | SAMN05421820_11354 | Not Available | Negative | 6865000 - 6866721 | 64202.1 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05421820_11355 | Not Available | Negative | 6866727 - 6867338 | 22961.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05421820_11356 | Not Available | Negative | 6867428 - 6867985 | 21227.1 |
| kup system potassium uptake protein | SAMN05421820_11357 | Not Available | Positive | 6868138 - 6870090 | 72823.4 |
| outer membrane protein insertion porin family | SAMN05421820_11358 | Not Available | Positive | 6870401 - 6872944 | 94574.8 |
| dna-binding response regulator, lytr/algr family | SAMN05421820_11359 | Not Available | Negative | 6872970 - 6873680 | 27351.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

