Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase (nad) | SAMN05421820_11340 | Not Available | Negative | 6848883 - 6849821 | 33042.2 |
| apolipoprotein d and lipocalin family protein | SAMN05421820_11341 | Not Available | Positive | 6850053 - 6850553 | 19630.8 |
| dna polymerase iii, alpha subunit | SAMN05421820_11342 | Not Available | Positive | 6850649 - 6855079 | 166898.0 |
| thioredoxin | SAMN05421820_11343 | Not Available | Positive | 6855214 - 6855531 | 11618.1 |
| protein of unknown function duf58 | SAMN05421820_11344 | Not Available | Positive | 6855598 - 6856518 | 35375.4 |
| acetylornithine/succinyldiaminopimelate/ putresci ne aminotransferase | SAMN05421820_11345 | Not Available | Negative | 6856524 - 6857717 | 43395.7 |
| hypothetical protein | SAMN05421820_11346 | Not Available | Negative | 6857733 - 6858182 | 17795.6 |
| hypothetical protein | SAMN05421820_11347 | Not Available | Negative | 6858194 - 6858874 | 25370.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_11348 | Not Available | Negative | 6858855 - 6859415 | 21928.2 |
| transketolase | SAMN05421820_11349 | Not Available | Negative | 6859468 - 6860427 | 34620.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

