Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l11 | SAMN05421820_11320 | Not Available | Positive | 6826773 - 6827216 | 15552.9 |
| large subunit ribosomal protein l1 | SAMN05421820_11321 | Not Available | Positive | 6827240 - 6827938 | 24489.8 |
| large subunit ribosomal protein l10 | SAMN05421820_11322 | Not Available | Positive | 6827941 - 6828462 | 18725.6 |
| large subunit ribosomal protein l7/l12 | SAMN05421820_11323 | Not Available | Positive | 6828526 - 6828900 | 12769.4 |
| dna-directed rna polymerase subunit beta | SAMN05421820_11324 | Not Available | Positive | 6829055 - 6832858 | 142349.0 |
| dna-directed rna polymerase subunit beta' | SAMN05421820_11325 | Not Available | Positive | 6832950 - 6837236 | 159658.0 |
| protein of unknown function | SAMN05421820_11326 | Not Available | Positive | 6837327 - 6837641 | 11686.0 |
| trna dimethylallyltransferase | SAMN05421820_11327 | Not Available | Negative | 6837638 - 6838549 | 34416.2 |
| pria4b orf-3-like protein | SAMN05421820_11328 | Not Available | Negative | 6838559 - 6839215 | 25243.6 |
| hdig domain-containing protein | SAMN05421820_11329 | Not Available | Negative | 6839286 - 6840692 | 53423.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

