Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate lyase | SAMN05421820_112241 | Not Available | Positive | 6813767 - 6814486 | 26949.7 |
| putative hemolysin | SAMN05421820_1131 | Not Available | Negative | 6814712 - 6816463 | 66841.7 |
| competence protein comea helix-hairpin-helix repeat region | SAMN05421820_1132 | Not Available | Positive | 6816545 - 6817459 | 35007.9 |
| adenine phosphoribosyltransferase | SAMN05421820_1133 | Not Available | Positive | 6817462 - 6817989 | 19060.4 |
| hypothetical protein | SAMN05421820_1134 | Not Available | Negative | 6818068 - 6818187 | 4520.74 |
| regulatory protein, luxr family | SAMN05421820_1135 | Not Available | Positive | 6818428 - 6819171 | 28606.4 |
| istb-like atp binding protein | SAMN05421820_1136 | Not Available | Negative | 6819172 - 6820218 | 39696.4 |
| acyl-coa dehydrogenase | SAMN05421820_1137 | Not Available | Positive | 6820427 - 6821590 | 42233.8 |
| hypothetical protein | SAMN05421820_1138 | Not Available | Negative | 6821684 - 6822055 | 14145.5 |
| small subunit ribosomal protein s21 | SAMN05421820_1139 | Not Available | Positive | 6822196 - 6822390 | 7535.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

