Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421820_101555 | Not Available | Negative | 681936 - 682895 | 36004.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_101556 | Not Available | Negative | 682908 - 683513 | 23749.9 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05421820_101557 | Not Available | Negative | 683564 - 685090 | 58770.4 |
| putative auto-transporter adhesin, head gin domain | SAMN05421820_101558 | Not Available | Negative | 685102 - 685752 | 23379.3 |
| hypothetical protein | SAMN05421820_101559 | Not Available | Negative | 685868 - 687043 | 41817.6 |
| hypothetical protein | SAMN05421820_101560 | Not Available | Positive | 687074 - 687313 | 9194.89 |
| adenosine deaminase | SAMN05421820_101561 | Not Available | Positive | 687551 - 689005 | 55846.9 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421820_101562 | Not Available | Negative | 689042 - 690202 | 43297.6 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421820_101563 | Not Available | Positive | 690632 - 691225 | 22837.6 |
| fecr protein | SAMN05421820_101564 | Not Available | Positive | 691387 - 692394 | 37770.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

