Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatine deiminase | SAMN05421820_112221 | Not Available | Positive | 6793351 - 6794403 | 39606.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN05421820_112222 | Not Available | Positive | 6794459 - 6795202 | 26307.8 |
| hypothetical protein | SAMN05421820_112223 | Not Available | Negative | 6795157 - 6795315 | 6157.59 |
| protein of unknown function | SAMN05421820_112224 | Not Available | Positive | 6795513 - 6796094 | 21641.9 |
| l,d-transpeptidase catalytic domain | SAMN05421820_112225 | Not Available | Negative | 6796161 - 6796919 | 28903.7 |
| hypothetical protein | SAMN05421820_112226 | Not Available | Positive | 6796999 - 6799083 | 77296.8 |
| uncharacterized membrane protein yeih | SAMN05421820_112227 | Not Available | Positive | 6799096 - 6799707 | 22333.2 |
| cell division protein ftsb | SAMN05421820_112228 | Not Available | Negative | 6799704 - 6800003 | 12047.4 |
| enolase | SAMN05421820_112229 | Not Available | Negative | 6800235 - 6801533 | 46652.3 |
| aquaporin z | SAMN05421820_112230 | Not Available | Negative | 6801686 - 6802378 | 23359.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

