Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound serine protease (clpp class) | SAMN05421820_112211 | Not Available | Positive | 6782842 - 6784125 | 45752.0 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN05421820_112212 | Not Available | Positive | 6784151 - 6784948 | 30126.0 |
| hypothetical protein | SAMN05421820_112213 | Not Available | Negative | 6784956 - 6785387 | 16660.1 |
| succinyl-coa synthetase alpha subunit | SAMN05421820_112214 | Not Available | Positive | 6785584 - 6786468 | 30363.0 |
| peptide-methionine (r)-s-oxide reductase/peptide methionine sulfoxide reductase msra/msrb | SAMN05421820_112215 | Not Available | Positive | 6786620 - 6787105 | 18145.9 |
| rare lipoprotein a | SAMN05421820_112216 | Not Available | Positive | 6787128 - 6787613 | 17925.8 |
| hypothetical protein | SAMN05421820_112217 | Not Available | Positive | 6787725 - 6787856 | 5099.11 |
| ribonucleoside-diphosphate reductase beta chain | SAMN05421820_112218 | Not Available | Positive | 6787999 - 6788973 | 37496.6 |
| ribonucleoside-diphosphate reductase alpha chain | SAMN05421820_112219 | Not Available | Positive | 6789047 - 6791425 | 89531.0 |
| n-carbamoylputrescine amidase | SAMN05421820_112220 | Not Available | Positive | 6792492 - 6793367 | 32781.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

