Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN05421820_112171 | Not Available | Positive | 6735080 - 6735541 | 17389.0 |
| hypothetical protein | SAMN05421820_112172 | Not Available | Positive | 6735567 - 6735803 | 8634.75 |
| permuted papain-like amidase enzyme, yaef/yiix, c92 family | SAMN05421820_112173 | Not Available | Positive | 6735866 - 6736639 | 29319.6 |
| putative rna 2'-phosphotransferase | SAMN05421820_112174 | Not Available | Positive | 6736711 - 6737286 | 22258.5 |
| hemoglobin | SAMN05421820_112175 | Not Available | Positive | 6737388 - 6737867 | 18008.4 |
| hypothetical protein | SAMN05421820_112176 | Not Available | Positive | 6737906 - 6738454 | 21147.8 |
| peroxiredoxin | SAMN05421820_112177 | Not Available | Negative | 6738605 - 6739744 | 42042.6 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421820_112178 | Not Available | Negative | 6739824 - 6741017 | 44821.7 |
| pkd-like family protein | SAMN05421820_112179 | Not Available | Negative | 6741020 - 6742531 | 56477.1 |
| protein of unknown function | SAMN05421820_112180 | Not Available | Negative | 6742537 - 6743334 | 30026.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

