Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | SAMN05421820_112161 | Not Available | Positive | 6723305 - 6724678 | 50278.0 |
| hlyd family secretion protein | SAMN05421820_112162 | Not Available | Positive | 6724725 - 6726071 | 48049.8 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN05421820_112163 | Not Available | Positive | 6726164 - 6727144 | 36501.3 |
| hypothetical protein | SAMN05421820_112164 | Not Available | Positive | 6727197 - 6727520 | 11701.3 |
| atp-dependent rna helicase dead | SAMN05421820_112165 | Not Available | Negative | 6727604 - 6729499 | 69150.7 |
| protein of unknown function | SAMN05421820_112166 | Not Available | Negative | 6729584 - 6730042 | 16755.2 |
| trna pseudouridine38-40 synthase | SAMN05421820_112167 | Not Available | Positive | 6730100 - 6730891 | 30086.1 |
| atp-binding cassette, subfamily b | SAMN05421820_112168 | Not Available | Positive | 6730896 - 6732668 | 66752.0 |
| hypothetical protein | SAMN05421820_112169 | Not Available | Negative | 6732690 - 6733526 | 30934.3 |
| alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin) | SAMN05421820_112170 | Not Available | Positive | 6733849 - 6735003 | 44212.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

