Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s4 | SAMN05421820_112131 | Not Available | Positive | 6689409 - 6690017 | 22999.6 |
| dna-directed rna polymerase subunit alpha | SAMN05421820_112132 | Not Available | Positive | 6690097 - 6691089 | 37243.0 |
| large subunit ribosomal protein l17 | SAMN05421820_112133 | Not Available | Positive | 6691181 - 6691726 | 20075.0 |
| 2'-5' rna ligase | SAMN05421820_112134 | Not Available | Negative | 6691807 - 6692358 | 21270.7 |
| methyltransferase domain-containing protein | SAMN05421820_112135 | Not Available | Positive | 6692472 - 6693689 | 45649.4 |
| molecular chaperone dnak | SAMN05421820_112136 | Not Available | Positive | 6693852 - 6695765 | 68483.0 |
| nucleotidyl transferase | SAMN05421820_112137 | Not Available | Negative | 6695888 - 6696787 | 33944.3 |
| hypothetical protein | SAMN05421820_112138 | Not Available | Negative | 6696877 - 6698418 | 56206.7 |
| putative aminopeptidase frvx | SAMN05421820_112139 | Not Available | Negative | 6698584 - 6699696 | 41450.6 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421820_112140 | Not Available | Negative | 6699780 - 6700199 | 16005.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

