Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l18 | SAMN05421820_112121 | Not Available | Positive | 6684306 - 6684659 | 12644.2 |
| small subunit ribosomal protein s5 | SAMN05421820_112122 | Not Available | Positive | 6684678 - 6685196 | 18024.1 |
| large subunit ribosomal protein l30 | SAMN05421820_112123 | Not Available | Positive | 6685201 - 6685380 | 6592.34 |
| lsu ribosomal protein l15p | SAMN05421820_112124 | Not Available | Positive | 6685489 - 6685935 | 15702.0 |
| protein translocase subunit secy/sec61 alpha | SAMN05421820_112125 | Not Available | Positive | 6685939 - 6687273 | 48295.6 |
| methionyl aminopeptidase | SAMN05421820_112126 | Not Available | Positive | 6687282 - 6688067 | 28270.9 |
| translation initiation factor if-1 | SAMN05421820_112127 | Not Available | Positive | 6688139 - 6688357 | 8308.24 |
| hypothetical protein | SAMN05421820_112128 | Not Available | Negative | 6688374 - 6688529 | 6134.46 |
| small subunit ribosomal protein s13 | SAMN05421820_112129 | Not Available | Positive | 6688556 - 6688933 | 14106.2 |
| small subunit ribosomal protein s11 | SAMN05421820_112130 | Not Available | Positive | 6688955 - 6689344 | 13816.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

