Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | SAMN05421820_11261 | Not Available | Positive | 6622775 - 6623686 | 34485.9 |
| lysophospholipase l1 | SAMN05421820_11262 | Not Available | Positive | 6623760 - 6624440 | 25785.4 |
| hypothetical protein | SAMN05421820_11263 | Not Available | Positive | 6624505 - 6624885 | 14617.0 |
| linoleoyl-coa desaturase | SAMN05421820_11264 | Not Available | Negative | 6624864 - 6626006 | 43724.3 |
| laci family transcriptional regulator | SAMN05421820_11265 | Not Available | Positive | 6626192 - 6627205 | 38039.6 |
| hypothetical protein | SAMN05421820_11266 | Not Available | Negative | 6627502 - 6627702 | 7737.56 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_11267 | Not Available | Positive | 6627737 - 6630853 | 114187.0 |
| susd family protein | SAMN05421820_11268 | Not Available | Positive | 6630874 - 6632289 | 51903.4 |
| protein of unknown function | SAMN05421820_11269 | Not Available | Positive | 6632302 - 6632817 | 19109.0 |
| hypothetical protein | SAMN05421820_11270 | Not Available | Positive | 6632829 - 6633611 | 28814.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

