Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(ile)-lysidine synthase | SAMN05421820_11221 | Not Available | Positive | 6583849 - 6585231 | 52501.7 |
| hypothetical protein | SAMN05421820_11222 | Not Available | Positive | 6585289 - 6585771 | 18786.9 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | SAMN05421820_11223 | Not Available | Positive | 6585843 - 6586988 | 42855.6 |
| 6-phosphogluconolactonase | SAMN05421820_11224 | Not Available | Negative | 6587040 - 6588149 | 40045.7 |
| 23s rrna pseudouridine2605 synthase | SAMN05421820_11225 | Not Available | Negative | 6588350 - 6589906 | 59130.2 |
| transglycosylase slt domain-containing protein | SAMN05421820_11226 | Not Available | Positive | 6590127 - 6590936 | 30096.6 |
| hypothetical protein | SAMN05421820_11227 | Not Available | Positive | 6590958 - 6591092 | 5134.04 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paae | SAMN05421820_11228 | Not Available | Positive | 6591052 - 6592074 | 38399.1 |
| excinuclease abc subunit a | SAMN05421820_11229 | Not Available | Positive | 6592189 - 6595032 | 105950.0 |
| nad(p)h-hydrate epimerase | SAMN05421820_11230 | Not Available | Positive | 6595043 - 6595990 | 34140.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

