Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | SAMN05421820_1121 | Not Available | Negative | 6560549 - 6561157 | 22915.3 |
| isopenicillin n synthase | SAMN05421820_1122 | Not Available | Positive | 6561407 - 6562369 | 36146.6 |
| protein of unknown function | SAMN05421820_1123 | Not Available | Negative | 6562451 - 6563023 | 21434.3 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421820_1124 | Not Available | Negative | 6563073 - 6564911 | 68246.5 |
| hypothetical protein | SAMN05421820_1125 | Not Available | Negative | 6564877 - 6566511 | 60168.8 |
| dna mismatch repair protein mutl | SAMN05421820_1126 | Not Available | Positive | 6566862 - 6568718 | 69102.7 |
| rhomboid-like protein | SAMN05421820_1127 | Not Available | Positive | 6568724 - 6569473 | 27649.4 |
| membrane associated serine protease, rhomboid family | SAMN05421820_1128 | Not Available | Positive | 6569466 - 6570329 | 31824.0 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05421820_1129 | Not Available | Positive | 6570329 - 6571441 | 42485.0 |
| cysteinyl-trna synthetase | SAMN05421820_11210 | Not Available | Positive | 6571460 - 6572920 | 55220.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

