Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin kinase / fmn adenylyltransferase | SAMN05421820_111226 | Not Available | Positive | 6535449 - 6536420 | 36833.6 |
| hypothetical protein | SAMN05421820_111227 | Not Available | Positive | 6536432 - 6536842 | 16145.6 |
| transporter, cpa2 family | SAMN05421820_111228 | Not Available | Positive | 6536901 - 6539126 | 81689.6 |
| predicted membrane protein | SAMN05421820_111229 | Not Available | Positive | 6539237 - 6540274 | 40059.9 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421820_111230 | Not Available | Negative | 6540280 - 6540900 | 23296.3 |
| excinuclease abc subunit a | SAMN05421820_111231 | Not Available | Negative | 6540915 - 6543716 | 104106.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_111232 | Not Available | Positive | 6543975 - 6544550 | 22587.5 |
| hypothetical protein | SAMN05421820_111233 | Not Available | Positive | 6544652 - 6544843 | 7354.85 |
| endonuclease-3 | SAMN05421820_111234 | Not Available | Positive | 6544996 - 6545664 | 25132.6 |
| recombination protein reca | SAMN05421820_111235 | Not Available | Positive | 6545796 - 6546809 | 36270.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

