Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | SAMN05421820_111216 | Not Available | Negative | 6522720 - 6525092 | 85255.5 |
| alpha-l-fucosidase | SAMN05421820_111217 | Not Available | Negative | 6525097 - 6526527 | 54287.5 |
| leucyl-trna synthetase | SAMN05421820_111218 | Not Available | Negative | 6526790 - 6529597 | 107775.0 |
| h+/cl-antiporter clca | SAMN05421820_111219 | Not Available | Negative | 6529661 - 6530938 | 45451.7 |
| hypothetical protein | SAMN05421820_111220 | Not Available | Negative | 6531045 - 6531461 | 15187.4 |
| cell division transport system permease protein | SAMN05421820_111221 | Not Available | Positive | 6531771 - 6532649 | 32548.6 |
| protein of unknown function | SAMN05421820_111222 | Not Available | Positive | 6532649 - 6532873 | 8415.71 |
| undecaprenyl-diphosphatase | SAMN05421820_111223 | Not Available | Positive | 6532881 - 6533675 | 29125.8 |
| trna pseudouridine55 synthase | SAMN05421820_111224 | Not Available | Positive | 6533753 - 6534502 | 27812.2 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN05421820_111225 | Not Available | Positive | 6534508 - 6535374 | 31254.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

