Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family protein (putative glucokinase) | SAMN05421820_111206 | Not Available | Negative | 6511445 - 6512653 | 43117.9 |
| signal peptidase i | SAMN05421820_111207 | Not Available | Negative | 6512850 - 6514046 | 46378.6 |
| 4-hydroxy-tetrahydrodipicolinate reductase | SAMN05421820_111208 | Not Available | Negative | 6514052 - 6514792 | 27190.3 |
| hypothetical protein | SAMN05421820_111209 | Not Available | Negative | 6514838 - 6515467 | 23398.7 |
| chromosome partitioning protein, parb family | SAMN05421820_111210 | Not Available | Negative | 6515467 - 6516387 | 34554.7 |
| chromosome partitioning protein | SAMN05421820_111211 | Not Available | Negative | 6516398 - 6517201 | 29604.0 |
| nad(p)h-dependent fmn reductase | SAMN05421820_111212 | Not Available | Positive | 6517385 - 6517906 | 19552.7 |
| iron complex transport system substrate-binding protein | SAMN05421820_111213 | Not Available | Negative | 6517913 - 6518368 | 17101.5 |
| peptide/nickel transport system substrate-binding protein | SAMN05421820_111214 | Not Available | Positive | 6518513 - 6520045 | 58279.9 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN05421820_111215 | Not Available | Negative | 6520105 - 6522558 | 88895.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

