Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s12p methylthiotransferase | SAMN05421820_111196 | Not Available | Positive | 6493464 - 6494798 | 50388.4 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | SAMN05421820_111197 | Not Available | Positive | 6494845 - 6496437 | 60915.0 |
| malate/lactate/ureidoglycolate dehydrogenase, ldh2 family | SAMN05421820_111198 | Not Available | Positive | 6496437 - 6497519 | 38936.7 |
| copper type ii ascorbate-dependent monooxygenase, c-terminal domain | SAMN05421820_111199 | Not Available | Negative | 6497523 - 6498839 | 50247.6 |
| ahpc/tsa family protein | SAMN05421820_111200 | Not Available | Negative | 6498860 - 6499405 | 20338.0 |
| starch-binding associating with outer membrane | SAMN05421820_111201 | Not Available | Negative | 6499511 - 6501223 | 64040.4 |
| iron complex outermembrane recepter protein | SAMN05421820_111202 | Not Available | Negative | 6501254 - 6504553 | 120010.0 |
| rok family protein (putative glucokinase) | SAMN05421820_111203 | Not Available | Negative | 6504678 - 6505889 | 43646.6 |
| starch-binding associating with outer membrane | SAMN05421820_111204 | Not Available | Negative | 6506390 - 6507979 | 59227.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_111205 | Not Available | Negative | 6508012 - 6511341 | 121306.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

