Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_111156 | Not Available | Positive | 6445657 - 6446256 | 23224.6 |
| hypothetical protein | SAMN05421820_111157 | Not Available | Positive | 6446262 - 6446546 | 10739.3 |
| hypothetical protein | SAMN05421820_111158 | Not Available | Negative | 6446601 - 6447917 | 48324.8 |
| starch-binding associating with outer membrane | SAMN05421820_111159 | Not Available | Negative | 6448053 - 6449768 | 63182.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_111160 | Not Available | Negative | 6449787 - 6453020 | 118520.0 |
| tpr repeat | SAMN05421820_111161 | Not Available | Positive | 6453607 - 6456093 | 93752.8 |
| molecular chaperone htpg | SAMN05421820_111162 | Not Available | Positive | 6456095 - 6457876 | 66981.7 |
| hypothetical protein | SAMN05421820_111163 | Not Available | Positive | 6457884 - 6458957 | 41835.9 |
| glutamine cyclotransferase | SAMN05421820_111164 | Not Available | Negative | 6459047 - 6459868 | 30467.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421820_111165 | Not Available | Negative | 6459916 - 6461259 | 49951.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

