Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN05421820_111146 | Not Available | Negative | 6439185 - 6439817 | 25298.5 |
| mannose-6-phosphate isomerase, type 2 | SAMN05421820_111147 | Not Available | Negative | 6440029 - 6440526 | 18901.1 |
| hypothetical protein | SAMN05421820_111148 | Not Available | Negative | 6440594 - 6441181 | 22356.4 |
| hypothetical protein | SAMN05421820_111149 | Not Available | Positive | 6441247 - 6441519 | 11016.3 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN05421820_111150 | Not Available | Negative | 6441735 - 6442097 | 13743.7 |
| pas domain s-box-containing protein | SAMN05421820_111151 | Not Available | Negative | 6442208 - 6443398 | 46203.6 |
| cro/c1-type hth dna-binding domain-containing protein | SAMN05421820_111152 | Not Available | Negative | 6443411 - 6443632 | 8404.3 |
| hypothetical protein | SAMN05421820_111153 | Not Available | Positive | 6443775 - 6444440 | 26001.4 |
| hypothetical protein | SAMN05421820_111154 | Not Available | Positive | 6444403 - 6445197 | 30879.7 |
| hypothetical protein | SAMN05421820_111155 | Not Available | Positive | 6445213 - 6445572 | 13937.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

