Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN05421820_111116 | Not Available | Positive | 6400203 - 6401087 | 33638.3 |
| putative hemin transport protein | SAMN05421820_111117 | Not Available | Negative | 6401174 - 6402202 | 38193.8 |
| iron complex transport system atp-binding protein | SAMN05421820_111118 | Not Available | Negative | 6402208 - 6402990 | 28924.5 |
| iron complex transport system permease protein | SAMN05421820_111119 | Not Available | Negative | 6402991 - 6404037 | 36506.5 |
| iron complex transport system substrate-binding protein | SAMN05421820_111120 | Not Available | Negative | 6404034 - 6404900 | 30809.6 |
| hmuy protein | SAMN05421820_111121 | Not Available | Negative | 6405082 - 6406503 | 50290.6 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN05421820_111122 | Not Available | Negative | 6406526 - 6408814 | 85098.5 |
| hypothetical protein | SAMN05421820_111123 | Not Available | Positive | 6409012 - 6410064 | 39271.0 |
| hypothetical protein | SAMN05421820_111124 | Not Available | Negative | 6410422 - 6410898 | 18576.5 |
| hupe / urej protein | SAMN05421820_111125 | Not Available | Positive | 6410971 - 6411561 | 22281.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

