Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna reductase | SAMN05421820_111106 | Not Available | Negative | 6390332 - 6391558 | 46528.7 |
| serine aminopeptidase, s33 | SAMN05421820_111107 | Not Available | Positive | 6391734 - 6392555 | 30441.2 |
| protein of unknown function | SAMN05421820_111108 | Not Available | Negative | 6392799 - 6393308 | 18384.3 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | SAMN05421820_111109 | Not Available | Negative | 6393424 - 6395391 | 73178.9 |
| uncharacterized membrane protein yckc, rdd family | SAMN05421820_111110 | Not Available | Negative | 6395436 - 6396056 | 23001.2 |
| hypothetical protein | SAMN05421820_111111 | Not Available | Negative | 6396090 - 6397022 | 34440.4 |
| phage shock protein pspc (stress-responsive transcriptional regulator) | SAMN05421820_111112 | Not Available | Negative | 6397041 - 6397796 | 27653.8 |
| short-chain dehydrogenase | SAMN05421820_111113 | Not Available | Negative | 6397831 - 6398520 | 24709.7 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05421820_111114 | Not Available | Positive | 6398705 - 6399439 | 25907.5 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05421820_111115 | Not Available | Positive | 6399436 - 6400188 | 28272.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

