Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_11196 | Not Available | Negative | 6381203 - 6381928 | 27057.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_11197 | Not Available | Negative | 6381909 - 6382475 | 21464.2 |
| putative membrane protein | SAMN05421820_11198 | Not Available | Negative | 6382581 - 6383126 | 21209.9 |
| uroporphyrinogen decarboxylase | SAMN05421820_11199 | Not Available | Negative | 6383192 - 6384214 | 38039.4 |
| hypothetical protein | SAMN05421820_111100 | Not Available | Negative | 6384230 - 6384745 | 19737.0 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN05421820_111101 | Not Available | Negative | 6384745 - 6385449 | 27368.4 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05421820_111102 | Not Available | Negative | 6385455 - 6386321 | 32326.5 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05421820_111103 | Not Available | Negative | 6386360 - 6387733 | 49823.9 |
| porphobilinogen synthase | SAMN05421820_111104 | Not Available | Negative | 6387746 - 6388714 | 35821.2 |
| hydroxymethylbilane synthase | SAMN05421820_111105 | Not Available | Negative | 6388727 - 6390307 | 58900.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

