Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN05421820_11186 | Not Available | Positive | 6370579 - 6371163 | 21705.6 |
| molybdate transport system atp-binding protein | SAMN05421820_11187 | Not Available | Positive | 6371163 - 6372632 | 55003.9 |
| 3-isopropylmalate dehydrogenase | SAMN05421820_11188 | Not Available | Positive | 6372637 - 6373725 | 39981.0 |
| 2-isopropylmalate synthase | SAMN05421820_11189 | Not Available | Positive | 6373738 - 6375246 | 55056.9 |
| l-threonine ammonia-lyase | SAMN05421820_11190 | Not Available | Positive | 6375248 - 6376498 | 45923.0 |
| hypothetical protein | SAMN05421820_11191 | Not Available | Negative | 6376575 - 6377735 | 43410.1 |
| bacteriocin-protection, ydei or ompd-associated | SAMN05421820_11192 | Not Available | Positive | 6378095 - 6378586 | 18792.8 |
| hypothetical protein | SAMN05421820_11193 | Not Available | Positive | 6378816 - 6379226 | 15253.3 |
| abc-type fe3+/spermidine/putrescine transport systems, atpase components | SAMN05421820_11194 | Not Available | Negative | 6379248 - 6380240 | 37261.0 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421820_11195 | Not Available | Negative | 6380375 - 6381181 | 30242.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

