Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f1 subcomplex beta subunit | SAMN05421820_11176 | Not Available | Positive | 6358537 - 6360042 | 54288.2 |
| atp synthase f1 subcomplex epsilon subunit | SAMN05421820_11177 | Not Available | Positive | 6360059 - 6360307 | 8750.85 |
| hypothetical protein | SAMN05421820_11178 | Not Available | Negative | 6360372 - 6360995 | 23686.1 |
| dna-binding response regulator, lytr/algr family | SAMN05421820_11179 | Not Available | Negative | 6361055 - 6361759 | 26885.1 |
| branched-chain amino acid aminotransferase | SAMN05421820_11180 | Not Available | Positive | 6362550 - 6363440 | 33390.2 |
| dihydroxy-acid dehydratase | SAMN05421820_11181 | Not Available | Positive | 6363442 - 6365139 | 59850.3 |
| acetolactate synthase, large subunit | SAMN05421820_11182 | Not Available | Positive | 6365173 - 6366912 | 63385.3 |
| acetolactate synthase, small subunit | SAMN05421820_11183 | Not Available | Positive | 6366923 - 6367534 | 23931.6 |
| ketol-acid reductoisomerase | SAMN05421820_11184 | Not Available | Positive | 6367611 - 6369092 | 53977.1 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05421820_11185 | Not Available | Positive | 6369152 - 6370567 | 51158.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

