Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory system conjugative dna transfer | SAMN05421820_11166 | Not Available | Negative | 6349083 - 6351134 | 76961.0 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN05421820_11167 | Not Available | Negative | 6351144 - 6352421 | 48492.1 |
| mobilisation protein (mobc) | SAMN05421820_11168 | Not Available | Negative | 6352406 - 6352813 | 15795.5 |
| hypothetical protein | SAMN05421820_11169 | Not Available | Negative | 6353007 - 6353180 | 6912.49 |
| hypothetical protein | SAMN05421820_11170 | Not Available | Positive | 6353288 - 6354763 | 56310.1 |
| hypothetical protein | SAMN05421820_11171 | Not Available | Positive | 6354935 - 6355150 | 8249.09 |
| site-specific dna recombinase | SAMN05421820_11172 | Not Available | Positive | 6355197 - 6356741 | 59811.8 |
| Trna-arg | Not Available | Not Available | Positive | 6356731 - 6356804 | Not Available |
| peroxiredoxin | SAMN05421820_11174 | Not Available | Negative | 6356914 - 6357378 | 17111.3 |
| dtdp-4-dehydrorhamnose reductase | SAMN05421820_11175 | Not Available | Negative | 6357391 - 6358296 | 32992.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

