Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteroides conjugation system atpase, trag family | SAMN05421820_11156 | Not Available | Negative | 6340274 - 6342742 | 92703.4 |
| protein of unknown function | SAMN05421820_11157 | Not Available | Negative | 6342739 - 6343071 | 12141.5 |
| protein of unknown function | SAMN05421820_11158 | Not Available | Negative | 6343164 - 6343517 | 12437.4 |
| hypothetical protein | SAMN05421820_11159 | Not Available | Negative | 6343608 - 6344120 | 19094.7 |
| rtec protein | SAMN05421820_11160 | Not Available | Negative | 6344267 - 6345118 | 33307.3 |
| hypothetical protein | SAMN05421820_11161 | Not Available | Negative | 6345441 - 6345719 | 10815.1 |
| hypothetical protein | SAMN05421820_11162 | Not Available | Negative | 6345730 - 6346356 | 24709.2 |
| hypothetical protein | SAMN05421820_11163 | Not Available | Positive | 6346820 - 6347200 | 15027.9 |
| regulatory protein, luxr family | SAMN05421820_11164 | Not Available | Negative | 6347239 - 6347889 | 25525.8 |
| acetyltransferase (gnat) family protein | SAMN05421820_11165 | Not Available | Negative | 6348238 - 6348807 | 21807.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

