Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_11116 | Not Available | Negative | 6293274 - 6296681 | 124909.0 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421820_11117 | Not Available | Negative | 6296954 - 6297892 | 36674.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_11118 | Not Available | Negative | 6297949 - 6298497 | 21538.2 |
| phytanoyl-coa dioxygenase (phyh) | SAMN05421820_11119 | Not Available | Negative | 6298732 - 6299622 | 33873.2 |
| arac-like ligand binding domain-containing protein | SAMN05421820_11120 | Not Available | Positive | 6299829 - 6300677 | 32435.6 |
| arylsulfatase a | SAMN05421820_11121 | Not Available | Negative | 6300737 - 6302293 | 58713.2 |
| starch-binding associating with outer membrane | SAMN05421820_11122 | Not Available | Negative | 6302400 - 6304229 | 69713.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_11123 | Not Available | Negative | 6304240 - 6307569 | 123801.0 |
| fecr protein | SAMN05421820_11124 | Not Available | Negative | 6307882 - 6309063 | 43623.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_11125 | Not Available | Negative | 6309143 - 6309688 | 20838.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

