Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421820_1116 | Not Available | Negative | 6276263 - 6277462 | 43841.5 |
| starch-binding associating with outer membrane | SAMN05421820_1117 | Not Available | Negative | 6277508 - 6279442 | 72724.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_1118 | Not Available | Negative | 6279465 - 6282833 | 122967.0 |
| hypothetical protein | SAMN05421820_1119 | Not Available | Positive | 6283092 - 6283280 | 7468.23 |
| fecr protein | SAMN05421820_11110 | Not Available | Negative | 6283191 - 6284381 | 44339.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_11111 | Not Available | Negative | 6284463 - 6285062 | 23356.1 |
| alpha-glucosidase | SAMN05421820_11112 | Not Available | Negative | 6285349 - 6287301 | 73568.1 |
| alpha-1,2-mannosidase, putative | SAMN05421820_11113 | Not Available | Negative | 6287316 - 6289496 | 82393.0 |
| glycosyl hydrolases related to gh101 family, ghl1-ghl3 | SAMN05421820_11114 | Not Available | Negative | 6289644 - 6291695 | 77106.1 |
| starch-binding associating with outer membrane | SAMN05421820_11115 | Not Available | Negative | 6291765 - 6293261 | 57037.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

