Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421820_110244 | Not Available | Positive | 6264170 - 6264943 | 29061.6 |
| pkd-like family protein | SAMN05421820_110245 | Not Available | Positive | 6264972 - 6266501 | 57778.7 |
| peroxiredoxin | SAMN05421820_110246 | Not Available | Positive | 6266545 - 6267927 | 51322.2 |
| aspartyl protease | SAMN05421820_110247 | Not Available | Positive | 6268046 - 6269209 | 42186.8 |
| protein of unknown function, duf255 | SAMN05421820_110248 | Not Available | Positive | 6269245 - 6270387 | 43875.2 |
| activator of hsp90 atpase homolog 1-like protein | SAMN05421820_1111 | Not Available | Negative | 6270713 - 6271159 | 16752.9 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05421820_1112 | Not Available | Positive | 6271283 - 6272272 | 37687.2 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN05421820_1113 | Not Available | Positive | 6272450 - 6272977 | 19468.6 |
| dna-binding transcriptional regulator, laci/purr family | SAMN05421820_1114 | Not Available | Negative | 6273026 - 6274858 | 69323.6 |
| protein of unknown function | SAMN05421820_1115 | Not Available | Negative | 6274974 - 6276179 | 43830.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

