Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05421820_110234 | Not Available | Negative | 6248824 - 6249873 | 39784.1 |
| protein of unknown function | SAMN05421820_110235 | Not Available | Positive | 6250250 - 6251686 | 52060.8 |
| cytochrome c551/c552 | SAMN05421820_110236 | Not Available | Positive | 6251701 - 6253662 | 72471.6 |
| alpha-l-fucosidase | SAMN05421820_110237 | Not Available | Positive | 6253667 - 6255298 | 61625.3 |
| selenocysteine lyase/cysteine desulfurase | SAMN05421820_110238 | Not Available | Negative | 6255369 - 6256502 | 42332.8 |
| methyltransferase domain-containing protein | SAMN05421820_110239 | Not Available | Negative | 6256527 - 6257138 | 22888.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_110240 | Not Available | Positive | 6257427 - 6257993 | 21871.5 |
| protein of unknown function | SAMN05421820_110241 | Not Available | Positive | 6258083 - 6259213 | 41815.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_110242 | Not Available | Positive | 6259343 - 6262723 | 126049.0 |
| susd family protein | SAMN05421820_110243 | Not Available | Positive | 6262726 - 6264153 | 54155.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

