Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin-like domain-containing protein | SAMN05421820_110224 | Not Available | Negative | 6235844 - 6236725 | 34289.2 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05421820_110225 | Not Available | Negative | 6237132 - 6237677 | 19073.5 |
| uncharacterized conserved protein, duf1800 family | SAMN05421820_110226 | Not Available | Positive | 6237823 - 6239694 | 69868.8 |
| uncharacterized conserved protein, duf1501 family | SAMN05421820_110227 | Not Available | Positive | 6239705 - 6240970 | 45477.3 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN05421820_110228 | Not Available | Positive | 6241069 - 6242220 | 42370.6 |
| protein of unknown function | SAMN05421820_110229 | Not Available | Negative | 6242253 - 6243569 | 48270.9 |
| beta-galactosidase | SAMN05421820_110230 | Not Available | Positive | 6243719 - 6246877 | 120387.0 |
| putative membrane protein | SAMN05421820_110231 | Not Available | Negative | 6247022 - 6247345 | 11557.1 |
| hypothetical protein | SAMN05421820_110232 | Not Available | Positive | 6247496 - 6248035 | 20859.0 |
| short-chain dehydrogenase | SAMN05421820_110233 | Not Available | Negative | 6248028 - 6248813 | 28567.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

