Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine protease do | SAMN05421820_101504 | Not Available | Positive | 621992 - 623704 | 63290.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421820_101505 | Not Available | Negative | 623875 - 624654 | 28989.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421820_101506 | Not Available | Negative | 624732 - 625319 | 22841.5 |
| muramoyltetrapeptide carboxypeptidase ldca (peptidoglycan recycling) | SAMN05421820_101507 | Not Available | Negative | 625379 - 626425 | 38427.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_101508 | Not Available | Positive | 626674 - 627333 | 25289.9 |
| protein of unknown function | SAMN05421820_101509 | Not Available | Positive | 627387 - 628625 | 46720.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_101510 | Not Available | Positive | 628945 - 632337 | 124955.0 |
| starch-binding associating with outer membrane | SAMN05421820_101511 | Not Available | Positive | 632358 - 634166 | 67321.0 |
| glycosyl hydrolase family 76 | SAMN05421820_101512 | Not Available | Positive | 634244 - 635365 | 42353.1 |
| hypothetical protein | SAMN05421820_101513 | Not Available | Negative | 635650 - 635757 | 4110.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

