Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 1 | SAMN05421820_110194 | Not Available | Positive | 6203071 - 6204957 | 70681.8 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN05421820_110195 | Not Available | Positive | 6205043 - 6206101 | 39408.3 |
| protoheme ix farnesyltransferase | SAMN05421820_110196 | Not Available | Positive | 6206119 - 6206994 | 32343.7 |
| cytochrome c oxidase subunit 3 | SAMN05421820_110197 | Not Available | Positive | 6207005 - 6207595 | 21740.1 |
| cytochrome c oxidase subunit 3 | SAMN05421820_110198 | Not Available | Positive | 6207626 - 6208333 | 26999.2 |
| caa(3)-type oxidase, subunit iv | SAMN05421820_110199 | Not Available | Positive | 6208353 - 6208703 | 13223.9 |
| protein sco1/2 | SAMN05421820_110200 | Not Available | Positive | 6208703 - 6209410 | 26726.2 |
| putative membrane protein | SAMN05421820_110201 | Not Available | Positive | 6209434 - 6210000 | 21347.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_110202 | Not Available | Positive | 6210197 - 6210814 | 23927.9 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421820_110203 | Not Available | Positive | 6210945 - 6211883 | 35584.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

