Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted o-methyltransferase yrrm | SAMN05421820_110184 | Not Available | Positive | 6190128 - 6190910 | 29957.9 |
| surface antigen | SAMN05421820_110185 | Not Available | Negative | 6190907 - 6192040 | 42892.9 |
| homospermidine synthase (spermidine-specific) | SAMN05421820_110186 | Not Available | Positive | 6192242 - 6193222 | 36952.3 |
| cytochrome c, mono-and diheme variants | SAMN05421820_110187 | Not Available | Positive | 6193475 - 6194770 | 47720.8 |
| quinol:cytochrome c oxidoreductase iron-sulfur protein precursor | SAMN05421820_110188 | Not Available | Positive | 6194819 - 6197896 | 112952.0 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 1 | SAMN05421820_110189 | Not Available | Positive | 6197920 - 6199392 | 55861.4 |
| quinol:cytochrome c oxidoreductase membrane protein | SAMN05421820_110190 | Not Available | Positive | 6199395 - 6199931 | 19935.3 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05421820_110191 | Not Available | Positive | 6199903 - 6200508 | 21871.0 |
| hypothetical protein | SAMN05421820_110192 | Not Available | Positive | 6200523 - 6201737 | 46231.8 |
| cytochrome c oxidase subunit 2 | SAMN05421820_110193 | Not Available | Positive | 6201806 - 6203050 | 46289.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

