Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | SAMN05421820_110174 | Not Available | Positive | 6179361 - 6181358 | 75087.6 |
| putative endonuclease | SAMN05421820_110175 | Not Available | Positive | 6181359 - 6181721 | 13962.5 |
| glutamine cyclotransferase | SAMN05421820_110176 | Not Available | Positive | 6181702 - 6182805 | 40244.0 |
| protein of unknown function | SAMN05421820_110177 | Not Available | Negative | 6182863 - 6183393 | 19285.2 |
| glucose-6-phosphate isomerase | SAMN05421820_110178 | Not Available | Negative | 6183481 - 6185130 | 61796.4 |
| amidohydrolase | SAMN05421820_110179 | Not Available | Positive | 6185248 - 6186552 | 46680.6 |
| hypothetical protein | SAMN05421820_110180 | Not Available | Positive | 6186634 - 6187146 | 17532.4 |
| peptide chain release factor 2 | SAMN05421820_110181 | Not Available | Positive | 6187524 - 6188297 | 29154.7 |
| acetyl esterase/lipase | SAMN05421820_110182 | Not Available | Positive | 6188300 - 6189217 | 33480.4 |
| transglutaminase-like superfamily protein | SAMN05421820_110183 | Not Available | Negative | 6189214 - 6190083 | 33695.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

