Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | SAMN05421820_110164 | Not Available | Positive | 6167874 - 6168125 | 9739.51 |
| phosphoribosylamine--glycine ligase | SAMN05421820_110165 | Not Available | Negative | 6168185 - 6169456 | 45475.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_110166 | Not Available | Positive | 6169770 - 6170270 | 19804.1 |
| hypothetical protein | SAMN05421820_110167 | Not Available | Positive | 6170257 - 6170910 | 24808.9 |
| preprotein translocase subunit seca | SAMN05421820_110168 | Not Available | Positive | 6171098 - 6174412 | 124376.0 |
| sporulation related domain-containing protein | SAMN05421820_110169 | Not Available | Positive | 6174432 - 6174929 | 18980.1 |
| amidohydrolase | SAMN05421820_110170 | Not Available | Positive | 6174919 - 6176106 | 43358.0 |
| hypothetical protein | SAMN05421820_110171 | Not Available | Positive | 6176108 - 6177061 | 37014.8 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421820_110172 | Not Available | Positive | 6177072 - 6178616 | 56571.1 |
| lysophospholipase l1 | SAMN05421820_110173 | Not Available | Positive | 6178622 - 6179287 | 24239.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

