Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, fis family | SAMN05421820_110124 | Not Available | Negative | 6116194 - 6117423 | 46151.3 |
| pp_05049 | SAMN05421820_110125 | Not Available | Negative | 6117442 - 6118890 | Not Available |
| putative methyltransferase, lic12133 family | SAMN05421820_110126 | Not Available | Positive | 6119049 - 6119849 | 30964.6 |
| hypothetical protein | SAMN05421820_110127 | Not Available | Positive | 6119842 - 6120849 | 39497.9 |
| hypothetical protein | SAMN05421820_110128 | Not Available | Positive | 6121103 - 6121582 | 17447.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_110129 | Not Available | Positive | 6121592 - 6122206 | 23677.0 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421820_110130 | Not Available | Positive | 6122219 - 6123220 | 37759.2 |
| tonb-dependent receptor plug domain | SAMN05421820_110131 | Not Available | Positive | 6123220 - 6125769 | 97010.4 |
| hypothetical protein | SAMN05421820_110132 | Not Available | Positive | 6125717 - 6126616 | 33596.0 |
| hypothetical protein | SAMN05421820_110133 | Not Available | Positive | 6126671 - 6128458 | 66662.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

