Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease adaptor protein clps | SAMN05421820_11094 | Not Available | Negative | 6078340 - 6078645 | 11815.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05421820_11095 | Not Available | Positive | 6078702 - 6079748 | 38400.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421820_11096 | Not Available | Negative | 6079769 - 6080644 | 31226.6 |
| enoyl-coa hydratase/carnithine racemase | SAMN05421820_11097 | Not Available | Negative | 6080648 - 6081409 | 28285.3 |
| tonb-dependent outer membrane receptor, susc/raga subfamily, signature region | SAMN05421820_11098 | Not Available | Negative | 6081420 - 6084113 | 99711.9 |
| hypothetical protein | SAMN05421820_11099 | Not Available | Negative | 6084227 - 6086911 | 100760.0 |
| dctp deaminase | SAMN05421820_110100 | Not Available | Negative | 6086998 - 6087534 | 20070.2 |
| 4'-phosphopantetheinyl transferase superfamily protein | SAMN05421820_110101 | Not Available | Positive | 6087601 - 6088242 | 24545.8 |
| lipoyl(octanoyl) transferase | SAMN05421820_110102 | Not Available | Positive | 6088250 - 6088948 | 26603.7 |
| hypothetical protein | SAMN05421820_110103 | Not Available | Positive | 6089027 - 6089509 | 17179.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

