Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m28 | SAMN05421820_11084 | Not Available | Negative | 6067617 - 6069212 | 58706.1 |
| hypothetical protein | SAMN05421820_11085 | Not Available | Negative | 6069913 - 6070695 | 29336.9 |
| abc-2 type transport system atp-binding protein | SAMN05421820_11086 | Not Available | Negative | 6070698 - 6071606 | 33699.4 |
| hypothetical protein | SAMN05421820_11087 | Not Available | Negative | 6071609 - 6071782 | 6183.85 |
| histidine kinase | SAMN05421820_11088 | Not Available | Positive | 6072046 - 6073074 | 39038.0 |
| dna-binding response regulator, lytr/algr family | SAMN05421820_11089 | Not Available | Positive | 6073071 - 6073826 | 28608.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05421820_11090 | Not Available | Negative | 6073834 - 6074568 | 27850.1 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN05421820_11091 | Not Available | Negative | 6074587 - 6075171 | 21967.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_11092 | Not Available | Negative | 6075155 - 6077647 | 91911.3 |
| thioredoxin | SAMN05421820_11093 | Not Available | Positive | 6077746 - 6078360 | 23022.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

