Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05421820_11074 | Not Available | Positive | 6052961 - 6054619 | 61739.9 |
| arylsulfatase a | SAMN05421820_11075 | Not Available | Positive | 6054678 - 6056198 | 55058.0 |
| helix-turn-helix domain-containing protein | SAMN05421820_11076 | Not Available | Positive | 6056450 - 6058729 | 85748.4 |
| diaminopimelate epimerase | SAMN05421820_11077 | Not Available | Negative | 6058730 - 6059542 | 30039.5 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN05421820_11078 | Not Available | Positive | 6059733 - 6061271 | 53552.1 |
| succinate dehydrogenase / fumarate reductase cytochrome b subunit | SAMN05421820_11079 | Not Available | Positive | 6061488 - 6062168 | 24903.2 |
| succinate dehydrogenase subunit a | SAMN05421820_11080 | Not Available | Positive | 6062196 - 6064175 | 73432.3 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | SAMN05421820_11081 | Not Available | Positive | 6064202 - 6064972 | 27804.2 |
| tonb family c-terminal domain-containing protein | SAMN05421820_11082 | Not Available | Negative | 6065066 - 6067051 | 74208.0 |
| predicted transcriptional regulator | SAMN05421820_11083 | Not Available | Negative | 6067048 - 6067425 | 14759.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

