Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix | SAMN05421820_11064 | Not Available | Negative | 6038535 - 6038798 | 9948.33 |
| putative n6-adenine-specific dna methylase | SAMN05421820_11065 | Not Available | Negative | 6038900 - 6040081 | 44453.5 |
| protein of unknown function | SAMN05421820_11066 | Not Available | Positive | 6040154 - 6040519 | 13451.7 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05421820_11067 | Not Available | Positive | 6041203 - 6043011 | 69152.7 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421820_11068 | Not Available | Positive | 6043011 - 6043706 | 26474.4 |
| glpgli family protein | SAMN05421820_11069 | Not Available | Negative | 6043703 - 6044470 | 28825.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_11070 | Not Available | Negative | 6044476 - 6047271 | 103220.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_11071 | Not Available | Positive | 6047517 - 6048086 | 22170.7 |
| fecr protein | SAMN05421820_11072 | Not Available | Positive | 6048167 - 6049324 | 42582.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_11073 | Not Available | Positive | 6049609 - 6052947 | 122207.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

