Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urocanate hydratase | SAMN05421820_11044 | Not Available | Negative | 6014934 - 6016598 | 60657.7 |
| iron complex outermembrane recepter protein | SAMN05421820_11045 | Not Available | Positive | 6017151 - 6019451 | 84029.2 |
| histidine ammonia-lyase | SAMN05421820_11046 | Not Available | Negative | 6019553 - 6021040 | 54092.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421820_11047 | Not Available | Positive | 6021127 - 6022116 | 37264.1 |
| hypothetical protein | SAMN05421820_11048 | Not Available | Negative | 6022111 - 6022890 | 29918.8 |
| predicted dehydrogenase | SAMN05421820_11049 | Not Available | Negative | 6022894 - 6023880 | 36812.8 |
| hypothetical protein | SAMN05421820_11050 | Not Available | Positive | 6024015 - 6024359 | 13280.3 |
| outer membrane protein ompa | SAMN05421820_11051 | Not Available | Negative | 6024451 - 6025131 | 23163.8 |
| abc-2 type transport system atp-binding protein | SAMN05421820_11052 | Not Available | Negative | 6025314 - 6026012 | 26267.6 |
| hypothetical protein | SAMN05421820_11053 | Not Available | Negative | 6026009 - 6027487 | 56388.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

