Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_11024 | Not Available | Positive | 5993695 - 5994189 | 18870.7 |
| s1/p1 nuclease | SAMN05421820_11025 | Not Available | Positive | 5994210 - 5995016 | 30261.2 |
| protein-tyrosine phosphatase | SAMN05421820_11026 | Not Available | Positive | 5995034 - 5995468 | 16882.1 |
| protein of unknown function | SAMN05421820_11027 | Not Available | Positive | 5995478 - 5996047 | 21531.8 |
| cyanophycin synthetase | SAMN05421820_11028 | Not Available | Negative | 5996411 - 5998954 | 93407.4 |
| cyanophycinase | SAMN05421820_11029 | Not Available | Positive | 5999297 - 6000172 | 30971.3 |
| l-asparaginase | SAMN05421820_11030 | Not Available | Positive | 6000177 - 6001019 | 29879.0 |
| hypothetical protein | SAMN05421820_11031 | Not Available | Positive | 6001091 - 6001723 | 23578.3 |
| carboxyl-terminal processing protease | SAMN05421820_11032 | Not Available | Positive | 6001782 - 6004070 | 85098.5 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN05421820_11033 | Not Available | Negative | 6004156 - 6005094 | 34976.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

