Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_10134 | Not Available | Positive | 58833 - 62243 | 125968.0 |
| susd family protein | SAMN05421820_10135 | Not Available | Positive | 62275 - 63687 | 53429.8 |
| protein of unknown function | SAMN05421820_10136 | Not Available | Positive | 63726 - 64496 | 29100.3 |
| pkd-like family protein | SAMN05421820_10137 | Not Available | Positive | 64517 - 66010 | 55268.5 |
| thioredoxin-related protein | SAMN05421820_10138 | Not Available | Positive | 66241 - 67506 | 46947.7 |
| aspartyl protease | SAMN05421820_10139 | Not Available | Positive | 67509 - 68498 | 36792.2 |
| hypothetical protein | SAMN05421820_10140 | Not Available | Negative | 68517 - 68765 | 9524.72 |
| hypothetical protein | SAMN05421820_10141 | Not Available | Negative | 68939 - 69136 | 7361.94 |
| cu2+-exporting atpase | SAMN05421820_10142 | Not Available | Positive | 69174 - 71402 | 79843.8 |
| copper chaperone copz | SAMN05421820_10143 | Not Available | Positive | 71432 - 71644 | 7697.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

