Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphokinase | SAMN05421820_109292 | Not Available | Positive | 5950062 - 5950625 | 21238.2 |
| ribosomal protein s18 acetylase rimi | SAMN05421820_109293 | Not Available | Positive | 5950622 - 5951116 | 18755.0 |
| tricorn protease | SAMN05421820_109294 | Not Available | Negative | 5951120 - 5954434 | 122497.0 |
| peptidase family m28 | SAMN05421820_109295 | Not Available | Negative | 5954455 - 5955762 | 48084.4 |
| protein of unknown function | SAMN05421820_109296 | Not Available | Negative | 5956003 - 5957103 | 41226.4 |
| rhodanese-related sulfurtransferase | SAMN05421820_109297 | Not Available | Positive | 5957270 - 5957590 | 11977.5 |
| hypothetical protein | SAMN05421820_109298 | Not Available | Positive | 5957594 - 5957797 | 7613.75 |
| l-alanine-dl-glutamate epimerase | SAMN05421820_109299 | Not Available | Negative | 5957769 - 5958806 | 38444.6 |
| hypothetical protein | SAMN05421820_109300 | Not Available | Positive | 5958891 - 5959859 | 37285.6 |
| membrane associated serine protease, rhomboid family | SAMN05421820_109301 | Not Available | Negative | 5959842 - 5960456 | 23416.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

