Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd and ragb outer membrane lipoprotein | SAMN05421820_109272 | Not Available | Positive | 5922597 - 5924045 | 53337.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_109273 | Not Available | Positive | 5924519 - 5927647 | 113160.0 |
| starch-binding associating with outer membrane | SAMN05421820_109274 | Not Available | Positive | 5927673 - 5929142 | 53287.1 |
| hypothetical protein | SAMN05421820_109275 | Not Available | Positive | 5929166 - 5929609 | 15544.9 |
| muramoyltetrapeptide carboxypeptidase | SAMN05421820_109276 | Not Available | Negative | 5929682 - 5930581 | 33128.9 |
| methionyl-trna synthetase | SAMN05421820_109277 | Not Available | Positive | 5930622 - 5932730 | 79977.1 |
| Trna-arg | Not Available | Not Available | Positive | 5932736 - 5932807 | Not Available |
| gluconokinase | SAMN05421820_109279 | Not Available | Positive | 5932962 - 5934419 | 54061.8 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN05421820_109280 | Not Available | Positive | 5934889 - 5937324 | 90803.6 |
| hypothetical protein | SAMN05421820_109281 | Not Available | Negative | 5937338 - 5937667 | 12652.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

