Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellum-specific peptidoglycan hydrolase flgj | SAMN05421820_109262 | Not Available | Negative | 5909171 - 5910070 | 34052.8 |
| flagellum-specific peptidoglycan hydrolase flgj | SAMN05421820_109263 | Not Available | Negative | 5910070 - 5910756 | 26181.2 |
| predicted o-methyltransferase yrrm | SAMN05421820_109264 | Not Available | Negative | 5910760 - 5911395 | 24112.2 |
| putative holliday junction resolvase | SAMN05421820_109265 | Not Available | Negative | 5911426 - 5911842 | 15850.2 |
| dna polymerase-3 subunit delta' | SAMN05421820_109266 | Not Available | Positive | 5911884 - 5913041 | 44104.1 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN05421820_109267 | Not Available | Positive | 5913044 - 5914483 | 53424.9 |
| gliding motility-associated lipoprotein gldh | SAMN05421820_109268 | Not Available | Positive | 5914476 - 5914955 | 18110.6 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN05421820_109269 | Not Available | Negative | 5915160 - 5916467 | 48004.1 |
| zinc carboxypeptidase | SAMN05421820_109270 | Not Available | Positive | 5916551 - 5919034 | 93139.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_109271 | Not Available | Positive | 5919358 - 5922585 | 116068.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

